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1

Mechanism-of-Action Classification of Antibiotics by Global Transcriptome Profiling

OâRourke, Aubrie, Beyhan, Sinem, Choi, Yongwook, Morales, Pavel, Chan, Agnes P., Espinoza, Josh L., Dupont, Chris L., Meyer, Kirsten J., Spoering, Amy, Lewis, Kim, Nierman, William C., Nelson, Karen

Journal:

Antimicrobial Agents and Chemotherapy

Année:

2020

Fichier:

PDF, 3.53 MB

2020

2

Genome-wide expression analysis of iron regulation in Burkholderia pseudomallei and Burkholderia mallei using DNA microarrays

Apichai Tuanyok, H. Stanley Kim, William C. Nierman, Yan Yu, John Dunbar, Richard A. Moore, Patricia Baker, Marina Tom, Jessmi M.L. Ling, Donald E. Woods

Journal:

FEMS Microbiology Letters

Année:

2005

Langue:

english

Fichier:

PDF, 371 KB

english, 2005

3

Cloning and characterization of a gene cluster for geldanamycin production in Streptomyces hygroscopicus NRRL 3602

Andreas Rascher, Zhihao Hu, Nina Viswanathan, Andreas Schirmer, Ralph Reid, William C Nierman, Matthew Lewis, C.Richard Hutchinson

Journal:

FEMS Microbiology Letters

Année:

2003

Langue:

english

Fichier:

PDF, 282 KB

english, 2003

4

The human thrombin receptor and proteinase activated receptor-2 genes are tightly linked on chromosome 5q13

Valentina A. Schmidt, William C. Nierman, Tamara V. Feldblyum, Donna R. Maglott, Wadie F. Bahou

Journal:

British Journal of Haematology

Année:

1997

Langue:

english

Fichier:

PDF, 595 KB

english, 1997

5

Mammalian probes and libraries at the ATCC

Donna R. Maglott, William C. Nierman

Journal:

Mammalian Genome

Année:

1991

Langue:

english

Fichier:

PDF, 420 KB

english, 1991

6

Transcriptome analysis ofAspergillus fumigatusexposed to voriconazole

Márcia Eliana da Silva Ferreira, Iran Malavazi, Marcela Savoldi, Axel A. Brakhage, Maria Helena S. Goldman, H. Stanley Kim, William C. Nierman, Gustavo H. Goldman

Journal:

Current Genetics

Année:

2006

Langue:

english

Fichier:

PDF, 1.06 MB

english, 2006

7

Simple sequence repeat (SSR)-based gene diversity inBurkholderia pseudomalleiandBurkholderia mallei

Han Song, Junghyun Hwang, Jaehee Myung, Hyoseok Seo, Hyojeong Yi, Hee-Sun Sim, Bong-Su Kim, William C. Nierman, Heenam Stanley Kim

Journal:

Molecules and Cells

Année:

2009

Langue:

english

Fichier:

PDF, 672 KB

english, 2009

8

Type VI secretion is a major virulence determinant in Burkholderia mallei

Mark A. Schell, Ricky L. Ulrich, Wilson J. Ribot, Ernst E. Brueggemann, Harry B. Hines, Dan Chen, Lyla Lipscomb, H. Stanley Kim, Jan Mrázek, William C. Nierman, David DeShazer

Journal:

Molecular Microbiology

Année:

2007

Langue:

english

Fichier:

PDF, 511 KB

english, 2007

9

SreA-mediated iron regulation in Aspergillus fumigatus

Markus Schrettl, H. Stanley Kim, Martin Eisendle, Claudia Kragl, William C. Nierman, Thorsten Heinekamp, Ernst R. Werner, Ilse Jacobsen, Paul Illmer, Hyojeong Yi, Axel A. Brakhage, Hubertus Haas

Journal:

Molecular Microbiology

Année:

2008

Langue:

english

Fichier:

PDF, 569 KB

english, 2008

10

Aspergillus fumigatus AcuM regulates both iron acquisition and gluconeogenesis

Hong Liu, Fabrice N. Gravelat, Lisa Y. Chiang, Dan Chen, Ghyslaine Vanier, Daniele E. Ejzykowicz, Ashraf S. Ibrahim, William C. Nierman, Donald C. Sheppard, Scott G. Filler

Journal:

Molecular Microbiology

Année:

2010

Langue:

english

Fichier:

PDF, 1.45 MB

english, 2010

11

Transcriptional divergence of the duplicated oxidative stress-responsive genes in the Arabidopsis genome

H. Stanley Kim, Yan Yu, Erik C. Snesrud, Linda P. Moy, Lara D. Linford, Brian J. Haas, William C. Nierman, John Quackenbush

Journal:

The Plant Journal

Année:

2005

Langue:

english

Fichier:

PDF, 472 KB

english, 2005

12

Aspergillus flavus expressed sequence tags for identification of genes with putative roles in aflatoxin contamination of crops

Jiujiang Yu, Catherine A. Whitelaw, William C. Nierman, Deepak Bhatnagar, Thomas E. Cleveland

Journal:

FEMS Microbiology Letters

Année:

2004

Langue:

english

Fichier:

PDF, 269 KB

english, 2004

13

The aflatoxin pathway regulator AflR induces gene transcription inside and outside of the aflatoxin biosynthetic cluster

Michael S. Price, Jiujiang Yu, William C. Nierman, H. Stanley Kim, Bethan Pritchard, Carrie A. Jacobus, Deepak Bhatnagar, Thomas E. Cleveland, Gary A. Payne

Journal:

FEMS Microbiology Letters

Année:

2006

Langue:

english

Fichier:

PDF, 119 KB

english, 2006

14

Tight control of mycotoxin biosynthesis gene expression in Aspergillus flavus by temperature as revealed by RNA-Seq

Jiujiang Yu, Natalie D. Fedorova, Beverly G. Montalbano, Deepak Bhatnagar, Thomas E. Cleveland, Joan W. Bennett, William C. Nierman

Journal:

FEMS Microbiology Letters

Année:

2011

Langue:

english

Fichier:

PDF, 87 KB

english, 2011

15

Hydrolysis of filter-paper cellulose to glucose by two recombinant endogenous glycosyl hydrolases of Coptotermes formosanus

Dunhua Zhang, Alan R. Lax, John M. Bland, Jiujiang Yu, Natalie Fedorova, William C. Nierman

Journal:

Année:

2010

Langue:

english

Fichier:

PDF, 1.22 MB

english, 2010

16

Genomic sequence of the pathogenic and allergenic filamentous fungus Aspergillus fumigatus

Nierman, William C., Pain, Arnab, Anderson, Michael J., Wortman, Jennifer R., Kim, H. Stanley, Arroyo, Javier, Berriman, Matthew, Abe, Keietsu, Archer, David B., Bermejo, Clara

Journal:

Année:

2005

Langue:

english

Fichier:

PDF, 1.19 MB

english, 2005

17

Corrigendum: Genomic sequence of the pathogenic and allergenic filamentous fungus Aspergillus fumigatus

Nierman, William C., Pain, Arnab, Anderson, Michael J., Wortman, Jennifer R., Kim, H. Stanley, Arroyo, Javier, Berriman, Matthew, Abe, Keietsu, Archer, David B., Bermejo, Clara

Journal:

Année:

2006

Langue:

english

Fichier:

PDF, 84 KB

english, 2006

18

Coding and Reimbursement for Weight Loss Surgery: Best Practice Recommendations

Lee M. Kaplan, John A. Fallon, Edward C. Mun, Alan M. Harvey, William V. Kastrinakis, Elvira Q. Johnson, Robert S. Nierman, Christopher R. Keroack

Journal:

Année:

2005

Langue:

english

Fichier:

PDF, 81 KB

english, 2005

19

Elucidation of the functional genomics of antioxidant-based inhibition of aflatoxin biosynthesis

Jong H. Kim, Jiujiang Yu, Noreen Mahoney, Kathleen L. Chan, Russell J. Molyneux, John Varga, Deepak Bhatnagar, Thomas E. Cleveland, William C. Nierman, Bruce C. Campbell

Journal:

International Journal of Food Microbiology

Année:

2008

Langue:

english

Fichier:

PDF, 587 KB

english, 2008

20

Potential of Aspergillus flavus genomics for applications in biotechnology

Thomas E. Cleveland, Jiujiang Yu, Natalie Fedorova, Deepak Bhatnagar, Gary A. Payne, William C. Nierman, Joan W. Bennett

Journal:

Trends in Biotechnology

Année:

2009

Langue:

english

Fichier:

PDF, 663 KB

english, 2009

21

Sequence and annotation of the 369-kb NY-2A and the 345-kb AR158 viruses that infect Chlorella NC64A

Lisa A. Fitzgerald, Michael V. Graves, Xiao Li, Tamara Feldblyum, William C. Nierman, James L. Van Etten

Journal:

Année:

2007

Langue:

english

Fichier:

PDF, 2.06 MB

english, 2007

22

Genome data: what do we learn?

William C Nierman, Jonathan A Eisen, Robert D Fleischmann, Claire M Fraser

Journal:

Current Opinion in Structural Biology

Année:

2000

Langue:

english

Fichier:

PDF, 219 KB

english, 2000

23

Aspergillus flavus genomics: gateway to human and animal health, food safety, and crop resistance to diseases

Jiujiang Yu, Thomas E. Cleveland, William C. Nierman, Joan W. Bennett

Journal:

Revista Iberoamericana de Micología

Année:

2005

Fichier:

PDF, 339 KB

2005

24

Origin and distribution of epipolythiodioxopiperazine (ETP) gene clusters in filamentous ascomycetes

Nicola J Patron, Ross F Waller, Anton J Cozijnsen, David C Straney, Donald M Gardiner, William C Nierman, Barbara J Howlett

Journal:

BMC Evolutionary Biology

Année:

2007

Langue:

english

Fichier:

PDF, 500 KB

english, 2007

25

Comparative analysis of programmed cell death pathways in filamentous fungi

Natalie D Fedorova, Jonathan H Badger, Geoff D Robson, Jennifer R Wortman, William C Nierman

Journal:

Année:

2005

Langue:

english

Fichier:

PDF, 430 KB

english, 2005

26

Bacterial genome adaptation to niches: Divergence of the potential virulence genes in threeBurkholderiaspecies of different survival strategies

H Stanley Kim, Mark A Schell, Yan Yu, Ricky L Ulrich, Saul H Sarria, William C Nierman, David DeShazer

Journal:

Année:

2005

Langue:

english

Fichier:

PDF, 531 KB

english, 2005

27

Burkholderia pseudomalleigenome plasticity associated with genomic island variation

Sarinna Tumapa, Matthew TG Holden, Mongkol Vesaratchavest, Vanaporn Wuthiekanun, Direk Limmathurotsakul, Wirongrong Chierakul, Edward J Feil, Bart J Currie, Nicholas PJ Day, William C Nierman, Sharon

Journal:

Année:

2008

Langue:

english

Fichier:

PDF, 742 KB

english, 2008

28

Genomic islands from five strains ofBurkholderia pseudomallei

Apichai Tuanyok, Benjamin R Leadem, Raymond K Auerbach, Stephen M Beckstrom-Sternberg, James S Beckstrom-Sternberg, Mark Mayo, Vanaporn Wuthiekanun, Thomas S Brettin, William C Nierman, Sharon J Peaco

Journal:

Année:

2008

Langue:

english

Fichier:

PDF, 346 KB

english, 2008

29

Genetic and phenotypic diversity inBurkholderia: contributions by prophage and phage-like elements

Catherine M Ronning, Liliana Losada, Lauren Brinkac, Jason Inman, Ricky L Ulrich, Mark Schell, William C Nierman, David DeShazer

Journal:

BMC Microbiology

Année:

2010

Langue:

english

Fichier:

PDF, 2.62 MB

english, 2010

30

Genomic patterns of pathogen evolution revealed by comparison ofBurkholderia pseudomallei, the causative agent of melioidosis, to avirulentBurkholderia thailandensis

Yiting Yu, H Stanley Kim, Hui Hoon Chua, Chi Ho Lin, Siew Hoon Sim, Daoxun Lin, Alan Derr, Reinhard Engels, David DeShazer, Bruce Birren, William C Nierman, Patrick Tan

Journal:

BMC Microbiology

Année:

2006

Langue:

english

Fichier:

PDF, 1.03 MB

english, 2006

31

BurkholderiaHep_Hag autotransporter (BuHA) proteins elicit a strong antibody response during experimental glanders but not human melioidosis

Rachaneeporn Tiyawisutsri, Matthew TG Holden, Sarinna Tumapa, Sirirat Rengpipat, Simon R Clarke, Simon J Foster, William C Nierman, Nicholas PJ Day, Sharon J Peacock

Journal:

BMC Microbiology

Année:

2007

Langue:

english

Fichier:

PDF, 484 KB

english, 2007

32

Mapping the Human Melanocortin 2 Receptor (Adrenocorticotropic Hormone Receptor; ACTHR) Gene (MC2R) to the Small Arm of Chromosome 18 (18p11.21-pter)

Nicholas C. Vamvakopoulos, Katherine Rojas, Joan Overhauser, A.Scott Durkin, William C. Nierman, George P. Chrousos

Journal:

Année:

1993

Fichier:

PDF, 118 KB

1993

33

Assignment of an Intron-Containing Human Heat-Shock Protein Gene (hsp90β, HSPCB) to Chromosome 6 near TCTE1 (6p21) and Two Intronless Pseudogenes to Chromosomes 4 and 15 by Polymerase Chain Reaction Amplification from a Panel of Hybrid Cell Lines

A.Scott Durkin, Donna R. Maglott, Nicholas C. Vamvakopoulos, Huda Y. Zoghbi, William C. Nierman

Journal:

Année:

1993

Fichier:

PDF, 229 KB

1993

34

Mapping the Human Growth Hormone-Releasing Hormone Receptor (GHRHR) Gene to the Short Arm of Chromosome 7 (7p13-p21) near the Epidermal Growth Factor Receptor (EGFR) Gene

Nicholas C. Vamvakopoulos, Jurgen Kunza, Ulrike Olberding, Stephen W. Scherer, Theologia O. Sioutopoulou, Valerie Schneider, A.Scott Durkin, William C. Nierman

Journal:

Année:

1994

Fichier:

PDF, 184 KB

1994

35

The Gene for Membrane Protein E16 (D16S469E) Maps to Human Chromosome 16q24.3 and Is Expressed in Human Brain, Thymus, and Retina

Donna R. Maglott, A.Scott Durkin, Sharon A. Lane, David F. Callen, Tamara V. Feldblyum, William C. Nierman

Journal:

Année:

1994

Fichier:

PDF, 131 KB

1994

36

Regional Assignment of 30 Expressed Sequence Tags on Human Chromosome 7 Using a Somatic Cell Hybrid Panel

RESHMA J. PATEL, JEFFREY T. KEEN, KARL-HEINZ GRZESCHIK, WILLIAM C. NIERMAN, PHILLIP HAYES, SHOMI S. BHATTACHARYA, CHRIS F. INGLEHEARN

Journal:

Année:

1995

Langue:

english

Fichier:

PDF, 69 KB

english, 1995

37

Regional Assignment and Tissue Expression of Twenty-Three Expressed Sequence Tags (ESTs) from Human Chromosome 5

Tamara V. Feldblyum, Donna R. Maglott, John D. McPherson, Mark Adams, Barbara L. Apostol, A.Scott Durkin, John J. Wasmuth, William C. Nierman

Journal:

Année:

1996

Langue:

english

Fichier:

PDF, 59 KB

english, 1996

38

Human BAC Ends Quality Assessment and Sequence Analyses

Shaying Zhao, Joel Malek, Gregory Mahairas, Lily Fu, William Nierman, J.Craig Venter, Mark D. Adams

Journal:

Année:

2000

Langue:

english

Fichier:

PDF, 199 KB

english, 2000

39

Mapping the human corticotropin releasing hormone binding protein gene (CRHBP) to the long arm of chromosome 5 (5q11.2–q13.3)

Nicholas C. Vamvakopoulos, Theologia O. Sioutopoulou, Scott A. Durkin, William C. Nierman, John J. Wasmuth, John D. McPherson

Journal:

Année:

1995

Langue:

english

Fichier:

PDF, 356 KB

english, 1995

40

Aspergillus flavus expressed sequence tags for identification of genes with putative roles in aflatoxin contamination of crops

Jiujiang Yu, Catherine A. Whitelaw, William C. Nierman, Deepak Bhatnagar, Thomas E. Cleveland

Journal:

FEMS Microbiology Letters

Année:

2004

Langue:

english

Fichier:

PDF, 272 KB

english, 2004

41

SMURF: Genomic mapping of fungal secondary metabolite clusters

Nora Khaldi, Fayaz T. Seifuddin, Geoff Turner, Daniel Haft, William C. Nierman, Kenneth H. Wolfe, Natalie D. Fedorova

Journal:

Fungal Genetics and Biology

Année:

2010

Langue:

english

Fichier:

PDF, 375 KB

english, 2010

42

Exogenous Yersinia pestis quorum sensing molecules N-octanoyl-homoserine lactone and N-(3-oxooctanoyl)-homoserine lactone regulate the LcrV virulence factor

H. Carl Gelhaus, David A. Rozak, William C. Nierman, Dan Chen, John J. Varga, Mojgan Zadeh, Ricky L. Ulrich, Jeffrey J. Adamovicz

Journal:

Microbial Pathogenesis

Année:

2009

Langue:

english

Fichier:

PDF, 238 KB

english, 2009

43

The power in comparisons

William C. Nierman, Claire M. Fraser

Journal:

Trends in Microbiology

Année:

2004

Langue:

english

Fichier:

PDF, 59 KB

english, 2004

44

Microbial genome sequencing 2000: new insights into physiology, evolution and expression analysis

William Nierman, Jonathan A Eisen, Claire M Fraser

Journal:

Research in Microbiology

Année:

2000

Langue:

english

Fichier:

PDF, 116 KB

english, 2000

45

Triallelic SNP-mediated genotyping of regenerated protoplasts of the heterokaryotic fungus Rhizoctonia solani

Elizabeth Thomas, Suman Pakala, Natalie D. Fedorova, William C. Nierman, Marc A. Cubeta

Journal:

Journal of Biotechnology

Année:

2012

Langue:

english

Fichier:

PDF, 830 KB

english, 2012

46

Genome sequence alterations detected upon passage ofBurkholderia malleiATCC 23344 in culture and in mammalian hosts

Claudia M Romero, David DeShazer, Tamara Feldblyum, Jacques Ravel, Donald Woods, H Stanley Kim, Yan Yu, Catherine M Ronning, William C Nierman

Journal:

Année:

2006

Langue:

english

Fichier:

PDF, 303 KB

english, 2006

47

Development stage-specific proteomic profiling uncovers small, lineage specific proteins most abundant in theAspergillus Fumigatusconidial proteome

Moo-Jin Suh, Natalie D Fedorova, Steven E Cagas, Susan Hastings, Robert D Fleischmann, Scott N Peterson, David S Perlin, William C Nierman, Rembert Pieper, Michelle Momany

Journal:

Proteome Science

Année:

2012

Langue:

english

Fichier:

PDF, 558 KB

english, 2012

48

Effect of competition on the production and activity of secondary metabolites in Aspergillus species

Losada, Liliana, Ajayi, Olufinmilola, Frisvad, Jens C., Yu, Jiujiang, Nierman, William C.

Journal:

Medical Mycology

Année:

2009

Langue:

english

Fichier:

PDF, 780 KB

english, 2009

49

Gene profiling for studying the mechanism of aflatoxin biosynthesis in Aspergillus flavus and A. parasiticus

Yu†, Jiujiang, Ronning†, Catherine M., Wilkinson†, Jeffery R., Campbell, Bruce C., Payne, Gary A., Bhatnagar, Deepak, Cleveland, Thomas E., Nierman, William C.

Journal:

Food Additives & Contaminants

Année:

2007

Langue:

english

Fichier:

PDF, 96 KB

english, 2007

50

A Clinical Lecture ON A CASE OF CEREBELLAR ABSCESS DUE TO INFECTION THROUGH THE INTERNAL AUDITORY MEATUS.

Maglott, Donna R., Nierman, William C.

Journal:

Année:

1905

Langue:

english

Fichier:

PDF, 393 KB

english, 1905